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Vol 43, No 2 (2024)

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Элементарные физико-химические процессы

Reaction operator in the main equation of spin chemistry

Purtov P.A.

Abstract

In our previous works, using an exactly solvable model as an example, we demonstrated the validity of the reaction operator in the basic equation of spin chemistry. However, in these works, only recombination from the singlet state was considered. Although the general relations allowed us to consider the general case. In the present paper, such a general case is analyzed. The radical pair comes into contact in a mixed singlet-triplet state, and recombination proceeds from both the singlet and triplet states. The result obtained fully corresponds to the basic equation of spin chemistry.

Himičeskaâ fizika. 2024;43(2):3-8
pages 3-8 views

ВЛИЯНИЕ ВНЕШНИХ ФАКТОРОВ НА ФИЗИКО-ХИМИЧЕСКИЕ ПРЕВРАЩЕНИЯ

Effect of terahertz radiation on the transport properties of albumin: binding with metal ions

Nemova E.F., Kobzeva T.V., Dultseva G.G.

Abstract

The effect of terahertz radiation on clusterization of bovine serum albumin (BSA) molecules and on BSA binding with nickel, cobalt and cadmium ions is investigated by means of high performance liquid chromatography and EPR spectroscopy under variation of the concentration of molecular oxygen in solution. Irradiation is detected to remove steric hindrance for oxygen adsorption. The degree of nickel and cobalt ion binding with irradiated BSA samples is substantially higher than with non-irradiated ones, while for cadmium the binding degree is the same and rather low in both cases. The functional groups in BSA molecule participating in metal ion binding are revealed by means of modeling.

Himičeskaâ fizika. 2024;43(2):9-16
pages 9-16 views

Kinetics and mechanism of chemical reactions, catalysis

Detection of photoreversibility of NO2–ONO linkage isomerization in [Co(NH3)5NO2]Cl(NO3 crystals by the photomechanical response method

Chizhik S.A., Gribov P.A., Kovalskii V.Y., Sidelnikov A.A.

Abstract

Linkage isomerization NO2-ONO (nitro-nitrito) in the complex cation [Co(NH3)5NO2]2+ is a well-studied classical reaction. It is believed that the photoisomerization of the nitro form to nitrito in the crystalline phase achieves complete transformation at low temperature, while the reverse transformation proceeds as a first-order thermal intramolecular reaction upon heating of the crystals. To date, there is no information about the possibility of reverse photoisomerization. In this work, photoisomerization in [Co(NH3)5NO2]Cl(NO3) crystals is investigated by the analysis of crystal deformation caused by the transformation at different wavelengths. A change in the lattice parameters during the transformation leads to reliably measurable elongation and bending of acicular crystals. It is shown that the limiting elongation of the crystal under prolonged irradiation depends on the wavelength, which proves the reversibility of photoisomerization. The quantum yield of the reverse reaction is estimated to be 0.04 of the quantum yield of the direct reaction.

Himičeskaâ fizika. 2024;43(2):17-32
pages 17-32 views

Электрические и магнитные свойства материалов

Kinetics of polaron capture by traps in a lithium niobate crystal

Fedorenko S.

Abstract

The problem of reversible transformation and trapping of small-radius polarons in a lithium niobate crystal is considered within the framework of the integral encounter theory which is binary in the concentration of reatants. Analytical solutions are obtained for the relaxation kinetics of polarons, their lifetimes, and the rate constants of the corresponding channels of a multistage reaction controlled by polaron mobility. The temperature and concentration dependences of the observed quantities are analyzed. It is shown that at low temperatures polarons accumulate in a bound state characterized by an anomalously low relaxation rate.

Himičeskaâ fizika. 2024;43(2):33-44
pages 33-44 views

ФИЗИЧЕСКИЕ МЕТОДЫ ИССЛЕДОВАНИЯ ХИМИЧЕСКИХ РЕАКЦИЙ

Photochemistry of IrCl63– complex in aqueous solutions

Zhdankin G.I., Grivin V.P., Plyusnin V.F., Tsentalovich Y.P., Glebov E.M.

Abstract

The photochemistry of the [IrIIICl6]3- complex in aqueous solutions was studied by the methods of stationary and laser flash photolysis. As the result of a light quantum absorption, parallel processes of photoaquatation and photoionization occur. The aquated electron eaq, which is formed with a quantum yield of 0.12 (excitation at 266 nm), is predominantly decayed in reactions with the initial complex and dissolved oxygen. The rate constant of eaq capture by the [IrIIICl6]3- complex was measured. The main final photolysis products are Ir(III) complexes with different compositions of ligands, as well as several percents of Ir(IV) complexes. The formation of final products occurs in the time range from milliseconds to seconds.

Himičeskaâ fizika. 2024;43(2):45-55
pages 45-55 views

Chemical physics of biological processes

Lipid-mediated effect of glycyrrhizin on the properties of the transmembrane domain of the E-protein of the SARS-CoV-2 virus

Kononova P.A., Selyutina O.Y., Polyakov N.E.

Abstract

The interaction of glycyrrhizin with the transmembrane domain of the E-protein of the SARS-CoV-2 virus (E-protein Trans-Membrane domain, ETM) in a homogeneous aqueous solution and in a model lipid membrane was studied using the selective nuclear Overhauser effect (selective NOESY) and NMR relaxation methods. The selective NOESY showed the presence of the interaction of glycyrrhizin with ETM in an aqueous solution, which is consistent with the literature modeling data, which indicate the possibility of penetration of the glycyrrhizin molecule into the channel formed by the ETM molecules. However, this conclusion is not confirmed by NOESY experiments in model lipid membranes, DMPC/DHPC bicelles. At the same time, the NMR relaxation method revealed the effect of glycyrrhizin on the mobility of both lipids and ETM molecules in bicelles. This suggests that GA affects the activity of the coronavirus E-protein indirectly through lipids.

Himičeskaâ fizika. 2024;43(2):56-61
pages 56-61 views

Aerobic decomposition of dimethylthiourea nitrosyl iron complex in the presence of albimin and glutathione

Kormukhina A.Y., Kusyapkulova A.B., Emel’yanova N.S., Pokidova O.V., Sanina N.A.

Abstract

Nitrosyl iron complexes (NICs) are natural “depots” of NO. NICs forms by the interaction of endogenous nitric oxide (NO) and non‒heme [2Fe-2S] proteins. Their synthetic analogues are promising compounds in medicines for the treatment of socially significant diseases. In this paper, the effect of bovine serum albumin (BSA) and reduced glutathione (GSH) on the decomposition of a nitrosyl iron complex with N,N′-dimethylthiourea ligands [Fe(SC(NHCH3)2)2(NO)2]BF4 (complex 1) under aerobic conditions have been investigated. In the absorption spectra complex 1 in the presence of albumin a wide band at 370–410 nm appears, which indicates the coordination of the aerobic decay product of the complex in the hydrophobic pocket of the protein with Cys34 and His39. The quenching of albumin intrinsic fluorescence during titration with complex 1 was studied by fluorescence spectroscopy. The Stern-Vollmer constant K = (2.3 ± 0.2) ∙ 105 М-1 and the Förster radius 22.4 Å were calculated. The UV-spectrum complex 1 in presence of GSH has two peaks at 312 and 363 nm, which respond glutathione binuclear NICs.

Himičeskaâ fizika. 2024;43(2):62-72
pages 62-72 views

Investigation of the behavior of dioxadet molecules in water by molecular dynamics simulation

Yakush E.A., Kim A.V., Medvedev N.N.

Abstract

The behaviour of dioxadet molecules in water is studied by the molecular dynamics simulation. This substance has anti-cancer properties and is used in clinical practice. However, its properties have not yet studied at the molecular level. This paper presents the first attempt of such investigation. Parametrization of dioxadet molecule was carried out using different available services: ATB, SwissParam as well as AmberTools in a standard form and with the use of additional quantum-chemical calculations. The obtained models are compared with each other. The number of hydrogen bonds of the molecule with water was calculated, the analysis of hydrated water was carried out. It was shown that the dioxadet molecules in water tend to associate. All the models obtained show similar properties, but the quantitative characteristics differ noticeably. Further research is needed to select the best model. Molecule topology files are available for use.

Himičeskaâ fizika. 2024;43(2):73-80
pages 73-80 views

Influence of different heat treatment regimes on the change of chemical composition and antibacterial activity of bee honey

Gruznov D.V., Gruznova O.A., Lobanov A.V., Sokhlikov A.B., Shcherbakova G.S., Stepanova S.P., Popov N.I.

Abstract

The studies of the chemical composition and antibacterial activity of heather honey (Calluna vulgaris) subjected to heat treatment at 35–40°C for 12 hours were carried out. The temperature range (38–40°C), at which decrease in the H2O2 concentration, decrease in D-glucose-1-oxidase activity and increase in the 5-hydroxymethylfurfural content, was identified. The degree of chemical changes was directly proportional to the temperature and time of thermal exposure. The correlation between changes in the chemical composition and antibacterial activity of honey against test microorganisms Escherichia coli (strain 1257), Staphylococcus aureus (strain 209-P) and Bacillus cereus (strain 96) was established. The obtained results showed that heating honey to 37 °C even for 12 hours didn’t cause undesirable changes in its chemical composition and decrease in antibacterial activity. Thus, this temperature regime can be considered more gentle and recommended for use in the heat treatment of this food product.

Himičeskaâ fizika. 2024;43(2):81-91
pages 81-91 views

Cationic effect in the formation of toxic and antiviral properties of Keggon heteropoly compounds

Dalidchik F.I., Lopatina O.A., Kovalevsky S.A., Isaeva E.I., Bidevkina M.V., Baklanova O.V., Gushchina E.A., Lisitsyn F.V., Balashov E.M., Mezentseva M.V., Pritchina T.N.

Abstract

The Cytotoxicity indices (IC50) of Keggin’s phosphorus-molybdenum heteropoly acids (HPCAs) and their sodium and potassium salts on dog kidney cells (MDSC) were determined. The antiviral activity of these compounds against topical strains of influenza A (H3N2 and H1N1) was revealed. The dependence of the biological properties of polyoxometalates (POMs) on the elemental composition of their molecules has been confirmed. It has been shown that when some of the molybdenum atoms are replaced by vanadium atoms, HPCA and their salts acquire higher cytotoxicities, which increase monotonically as the number of substitutions increases. For the first time, the dependence of the biological activity of HPCA and their salts on the mass of cations has been established and interpreted. In vivo (on white outbred mice) the values of semi-lethal doses (DL50) of these compounds were established. For aqueous solutions of sodium and potassium salts of GPCA in a wide range of concentrations (from 0.05 μM to 15 μM), the values of the toxicity index (It) were determined on the model of motile cells. It has been established that GPCA and their salts are classified as moderately dangerous toxic substances and have selective antiviral activity, which at low concentrations (less than 15 μM) for influenza A strains is manifested mainly by a decrease in hemagglutination activity (HA).

Himičeskaâ fizika. 2024;43(2):92-102
pages 92-102 views

ХИМИЧЕСКАЯ ФИЗИКА НАНОМАТЕРИАЛОВ

Inglet oxygen generaion via silver nanoparticles UV-photoexcitation

Ershov K.S., Valiulin S.V., Pyryaeva A.P.

Abstract

The NIR-luminescence of suspension of silver nanoparticles stabilized in distilled water has been investigated by photoexcitation of surface plasmon resonance (SPR). The observed short-living luminescence with the spectral maximum at 1300 nm is attributed to the singlet oxugen molecules luminescence. The singlet oxygen generation is assumed to pass in two stages as a result of three-photon process. First the one-photon SPR excitation of silver nanoparticle is occurred and leads to superoxide oxygen generation on the nanoparticle surface. Next the superoxide anion absorbs two more photons of the same laser pulse resulting in electron photodetachment with singlet oxygen formation. During a long period of UV-irradiation the studying suspension ceases to be photostable and sedimentation occurs. The sedimentation may be related to disturbance of nanoparticles steric stability resulting in more efficient superoxide anion adsorption on nanoparticles surface with silver oxide formation.

Himičeskaâ fizika. 2024;43(2):103-111
pages 103-111 views

Synthesis and characterization of prebiotic composite struvite/kappa-carrageenan

Kon’kova T.V., Klushina N.V., Romashchenko A.V., Losev E.A., Vedeeva A.D., Sukhov B.G.

Abstract

A struvite / kappa-carrageenan composite was synthesized from an aqueous solution of a polysaccharide and inorganic precursors. The phase, elemental composition and sizes of composite particles in an aqueous colloidal solution have been studied by X-ray phase analysis, X-ray energy dispersive analysis, and dynamic light scattering. It has been shown that this promising prebiotic composite is capable of producing diffusion-mobile aqueous colloidal solutions with varying degrees of association of structural elements, which is convenient for use in biomedicine.

Himičeskaâ fizika. 2024;43(2):112-118
pages 112-118 views